To add more than one flag to a map, just do this, here is example from my file. Notice that AloneInTheDark appears in three lines, but each of these lines still has their own unique index:
mMap[0]=(n="DM-Agony",X=-224,Y=-256,Z=1,P=-4400,R=0,W=0,U=True,i=0) mMap[1]=(n="DM-AggressiveII",X=-1914,Y=-532,Z=82,P=0,R=0,W=-19752,U=False,i=0) mMap[2]=(n="DM-ArcaneTemple",X=-446,Y=2363,Z=572,P=-5160,R=176,W=-15632,U=False,i=0) mMap[3]=(n="DM-Viridian-TOURNEY",X=1200,Y=-523,Z=16,P=-5800,R=0,W=16552,U=False,i=0) mMap[4]=(n="DM-Closer",X=738,Y=1455,Z=60,P=0,R=0,W=27240,U=False,i=0) mMap[5]=(n="DM-Codex",X=745,Y=-86,Z=78,P=0,R=0,W=0,U=False,i=0) mMap[6]=(n="DM-AloneintheDark",X=314,Y=-1054,Z=652,P=-5280,R=-248,W=16912,U=False,i=0) mMap[7]=(n="DM-AloneintheDark",X=560,Y=-1054,Z=652,P=-5280,R=-248,W=16912,U=False,i=0) mMap[8]=(n="DM-AloneintheDark",X=61,Y=-1054,Z=652,P=-5280,R=-248,W=16912,U=False,i=0) mMap[9]=(n="DM-Compulsive",X=-614,Y=205,Z=-67,P=0,R=0,W=-15888,U=False,i=0)
etc.
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